Dave Baker

Head of Sequencing

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Support Group: Sequencing

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I am responsible for all core sequencing in Quadram Institute Bioscience. I have been on the Norwich Research Park for over 25 years, working at the Sainsbury Laboratory, John Innes Centre and Earlham Institute, running and maintaining core genomics services.

Pallen MJ, Ponsero A, Telatin A, Moss CJ, Baker D, Heavens D, Davidson GL. (2025)

Faecal metagenomes of great tits and blue tits provide insights into host, diet, pathogens and microbial biodiversity.

Access microbiology


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Anwar S, Lamaudiere M, Hassall J, Dehinsilu J, Bhuller RK, Hold GL, Vázquez-Campos X, Mahnert A, Moissl-Eichinger C, Gallé B, Kainz G, Pjevac P, Hausmann B, Schwarz J, Kohl G, Berry D, Vancuren SJ, Allen-Vercoe E, Nielsen N, Sørensen N, Eklund A, Nielsen HB, Riedel R, Krause JL, Chang H-D, Park S, Song H-Y, Seo H, Ul-Haq A, Kim S, Kwon Y, Park S, Soberon X, Silva-Herzog E, Verlouw JAM, Arp P, Jhamai M, Kraaij R, Geelen AR, Ducarmon QR, Smits WK, Kuijper EJ, Zwittink RD, van Best, Penders J, Le G, Driessen C, Kool J, Shetty SA, Fuentes S, Demirci M, Yigin A, Whalley C, Beggs AD, Quince C, James R, Raguideau S, Gordon M, Mate R, Fritzsche M, Danckert NP, Blanco JM, Marchesi JR, Rauch M, Williamson RA, Van't Wout, Kritz A, Rosecker S, Stevens R, Laws L, Sayavedra L, Romano S, Telatin A, Baker D, Narbad A, Servetas SL, Kralj JG, Forry SP, Hunter ME, Dootz JN, Jackson SA, Mason CE, Butler DJ, Mozsary C, Foox J, Damle N, Resh A, Busswitz A, Lenz P, Sontag S, Cross A, Sanchez C, Guo M, Olson K, Smith EA, La Reau, Ward T, Kuersten S, Hyde F, Khrebtukova I, Schroth G, Rijpkema S, Amos GCA, Sergaki C. (2025)

DNA reference reagents isolate biases in microbiome profiling: a global multi-lab study.

mSystems


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James SA, Som N, Turner A, Baker DJ, Narbad A. (2025)

Draft genome sequence of a Kombucha isolate of Pichia kudriavzevii

Microbiology Resource Announcements


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Kumar M, Sayavedra L, Baker DJ, Shouche YS, Narbad A. (2025)

Genome sequence of Eubacterium callanderi AM6, isolated from a Parkinson’s disease patient.

Microbiology resource announcements


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Carding SR, Purse C, Parker A, Baker D, Moss C, Evans R, James S, Durham J, Funnell SGP. (2025)

Intestinal microbiota profiles of captive-bred cynomolgus macaques reveal influence of biogeography and age

Animal Microbiomes, 7, 47


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Haagmans R, Charity OJ, Baker D, Telatin A, Savva GM, Adriaenssens EM, Powell PP, Carding SR. (2025)

Assessing Bias and Reproducibility of Viral Metagenomics Methods for the Combined Detection of Faecal RNA and DNA Viruses.

Viruses


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Kellingray L, Savva GM, Garcia-Gutierrez E, Snell J, Romano S, Yara DA, Altera A, de Oliveira Martins L, Hutchins C, Baker D, Hayhoe A, Hacon C, Elumogo N, Narbad A, Sayavedra L. (2025)

Temporal dynamics of SARS-CoV-2 shedding in feces and saliva: a longitudinal study in Norfolk, United Kingdom during the 2021-2022 COVID-19 waves.

Microbiology spectrum


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Scadden J, Ansorge R, Romano S, Telatin A, Baker DJ, Evans R, Gherghisan-Filip C, Zhang ZJ, Mayer MJ, Narbad A. (2025)

The nisin O cluster: species dissemination, candidate leader peptide proteases and the role of regulatory systems

Microbiology


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