Katarzyna Sidorczuk

(she/her)

Research Scientist

Contact via email

Microbial Genomes, Strains and Evolution

View Falk Hildebrand's group

Links/websites:

ORCID

Biography

Recent Publications

I’m a bioinformatician with experience in the use of machine learning for prediction of peptide activity and protein localization.

I also worked with bacterial genomics and developed a tool for analysis of Escherichia coli adhesiome. Currently, I am interested in the human gut microbiome, especially tracing microbe transmissions between family members and identifying factors that enable colonisation.

Kolenda R, Hassan MM, Arrieta-Gisasola A, Kamara A, Ansorge R, Sidorczuk K, Acton L, Thilliez G, Baker DJ, Burdukiewicz M, Stares MD, Browne HP, Le Gall, Torres RC, Chavez-Arroyo A, Garrett J, Stevens MP, Lawley TD, Bäumler AJ, La Ragione, Hildebrand F, Kingsley RA. (2026)

Copper is an intestinal habitat filter affecting the gut microbiota interactions with Salmonella Typhimurium.

Microbiome

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Gold Lock

Khan MM, Sidorczuk K, Becker J, Aleksandrowicz A, Baraniewicz K, Ludwig C, Ali A, Kingsley R, Schierack P, Kolenda . (2024)

Characterization of clumpy adhesion of Escherichia coli to human cells and associated factors influencing antibiotic sensitivity

Microbiology spectrum

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Gold Lock

Sidorczuk K, Burdukiewicz M, Cerk K, Fritscher J, Kingsley RA, Schierack P, Hildebrand F, Kolenda . (2024)

adhesiomeR: a tool for Escherichia coli adhesin classification and analysis

BMC Genomics